Prof. Dr. Stefan Decker — Informatik 5 (Information Systems)

2021

Towards Easy Reusability in the Semantic Web

Published in Advances in Pattern-Based Ontology Engineering by Johannes Theissen-Lipp, Lars Gleim, Stefan Decker

FactStack: Interoperable Data Management and Preservation for the Web and Industry 4.0

Published in Proceedings of the 19th Symposium for Database Systems for Business, Technology and Web by Lars Gleim, Jan Pennekamp, Liam Tirpitz, Sascha Welten, Florian Brillowski, Stefan Decker

DeepHateExplainer: ExplainableHate Speech Detection in Under-resourced Bengali Language

Published in IEEE International Conference on Data Science and Advanced Analytics (DSAA'2021) by Stefan Decker, Md. Rezaul Karim

DeepKneeExplainer: Explainable Knee Osteoarthritis Diagnosis from Radiographs and Magnetic Resonance Imaging

Published in IEEE Access by Md. Rezaul Karim, Till Döhmen, Michael Cochez, Oya Beyan, Dietrich Rebholz-Schuhmann, Stefan Decker

HTTP Extensions for the Management of Highly Dynamic Data Resources

Published in Proceedings of the 18th Extended Semantic Web Conference 2021 by Lars Gleim, Liam Tirpitz, Stefan Decker

Teaching Semantic Web Technologies through Interactive Jupyter Notebooks

Published in Companion Proceedings of SEMANTiCS 2021 EU, September 6-9, 2021, Amsterdam by Lars Pieschel, Sascha Welten, Lars Gleim, Stefan Decker

Towards Easy Vocabulary Drafts with Neologism 2.0

Published in Proceedings of the 18th Extended Semantic Web Conference 2021 by Johannes Theissen-Lipp, Lars Gleim, Michael Cochez, Iraklis Dimitriadis, Hussain Ali, Daniel Hoppe Alvarez, Christoph Lange, Stefan Decker

DAMS: A Distributed Analytics Metadata Schema

Published in Data Intelligence by Sascha Welten, Stefan Decker, Oya Beyan, Laurenz Neumann, Yeliz Ucer Yediel, Luiz Olavo Bonino da Silva Santos

Towards a Continuously Improving Composites Manufacturing by Employing the Internet of Production

Published in CAMX Conference Proceedings. Dallas, TX, October 19-21, 2021 by Florian Brillowski, Lars Gleim, Martin Liebenberg, Thomas Schemmer, Liam Tirpitz, Stefan Decker, Gerhard Lakemeyer, Martina Ziefle, Christoph Greb, T. Gries

Data Reliability and Trustworthiness through Digital Transmission Contracts

Published in Proceedings of the 18th Extended Semantic Web Conference 2021 by Simon Mangel, Lars Gleim, Jan Pennekamp, Klaus Wehrle, Stefan Decker

Capturing Provenance Information in the File System

Published in Companion Proceedings of SEMANTiCS 2021 EU, September 6-9, 2021, Amsterdam by Lars Gleim, Leon Müller, Florian Brillowski, Stefan Decker

LISSU: Integrating Semantic Web Concepts Into SOA Frameworks

Published in Proceedings of the 23rd International Conference on Enterprise Information Systems 2021 by Johannes Theissen-Lipp, Siyabend Sakik, Moritz Kröger, Stefan Decker

2020

Convolutional Embedded Networks for Population Scale Clustering and Bio-ancestry Inferencing

Published in IEEE/ACM Transactions on Computational Biology and Bioinformatics by Md. Rezaul Karim, Michael Cochez, Dietrich Rebholz-Schuhmann, Oya Beyan, Stefan Decker

Automatic Bootstrapping of GraphQL Endpoints for RDF Triple Stores

Published in Proceedings of the 4th Workshop on Storing, Querying, and Benchmarking the Web of Data (QuWeDa 2020) at ISWC'20, November 2-3 2020 by Lars Gleim, Tim Holzheim, István Koren, Stefan Decker

Deep learning-based clustering approaches for bioinformatics

Published in Briefings in Bioinformatics by Md. Rezaul Karim, Oya Beyan, Michael Cochez, Stefan Decker

FactDAG: Formalizing Data Interoperability in an Internet of Production

Published in IEEE Internet of Things Journal by Lars Gleim, Jan Pennekamp, Martin Liebenberg, Melanie Buchsbaum, Philipp Niemietz, Simon Knape, Alexander Epple, Simon Storms, Daniel Trauth, Thomas Bergs, Christian Brecher, Stefan Decker, Gerhard Lakemeyer, Klaus Wehrle

SchemaTree: Maximum-likelihood Property Recommendation for Wikidata

Published in Proceedings of the 17th Extended Semantic Web Conference 2020 by Lars Gleim, Rafael Schimassek, Dominik Hüser, Maximilian Peters, Christoph Krämer, Michael Cochez, Stefan Decker

Enabling Ad-hoc Reuse of Private Data Repositories through Schema Extraction

Published in Journal of Biomedical Semantics volume 11, Article number: 6 (2020) by Lars Gleim, Md. Rezaul Karim, Lukas Zimmermann, Oliver Kohlbacher, Holger Stenzhorn, Stefan Decker, Oya Beyan

Towards Reusability in the Semantic Web: Decoupling Identifiers, Structure, and Reasoning

Published in Proceedings of the 11th Workshop on Ontology Design and Patterns (WOP 2020) at ISWC'20, November 2-3 2020 by Johannes Theissen-Lipp, Lars Gleim, Stefan Decker

Open Challenges for the Management and Preservation of Evolving Data on the Web

Published in Proceedings of the 6th Workshop on Managing the Evolution and Preservation of the Data Web (MEPDaW 2020) at ISWC'20, November 2-3 2020 by Lars Gleim, Stefan Decker

Expressing FactDAG Provenance with PROV-O

Published in Proceedings of the 6th Workshop on Managing the Evolution and Preservation of the Data Web (MEPDaW 2020) at ISWC'20, November 2-3 2020 by Lars Gleim, Liam Tirpitz, Jan Pennekamp, Stefan Decker

Timestamped URLs as Persistent Identifiers

Published in Proceedings of the 6th Workshop on Managing the Evolution and Preservation of the Data Web (MEPDaW 2020) at ISWC'20, November 2-3 2020 by Lars Gleim, Stefan Decker

DeepCOVIDExplainer: Explainable COVID-19 Diagnosis from Chest X-ray Images

Published in IEEE International Conference on Bioinformatics and Biomedicine (BIBM'2020) by Md. Rezaul Karim, Till Döhmen, Michael Cochez, Oya Beyan, Dietrich Rebholz-Schuhmann, Stefan Decker

2019

Design of the SMITH Metadata Services

Published by Matthias Löbe, Oya Beyan, Sebastian Stäubert, Frank Meineke, Danny Ammon, Alfred Winter, Stefan Decker, Markus Löffler, Toralf Kirsten

Security Considerations for Collaborations in an Industrial IoT-based Lab of Labs

Published in Proceedings of the 3rd IEEE Global Conference on Internet of Things (GCIoT '19), December 4–7, 2019, Dubai, United Arab Emirates Publisher: IEEE, December 2019 by Jan Pennekamp, Markus Dahlmanns, Lars Gleim, Stefan Decker, Klaus Wehrle

OncoNetExplainer: Explainable Predictions of Cancer Types Based on Gene Expression Data

Published in 19th IEEE International Conference on Bioinformatics and Bioengineering (IEEE BIBE 2019) by Md. Rezaul Karim, Michael Cochez, Oya Beyan, Stefan Decker, Christoph Lange

Implementation of Clinical Decision Support Services to Detect Potential Drug-Drug Interaction Using Clinical Quality Language

Published in Stud Health Technol Inform by Binh-Phi Nguyen, Thomas Reese, Stefan Decker, Daniel C. Malone, Richard D. Boyce, Oya Beyan

Design of Metadata Services for Clinical Data Interoperability in Germany

Published in Stud Health Technol Inform by Matthias Löbe, Oya Beyan, Sebastian Stäubert, Frank Meineke, Danny Ammon, Alfred Winter, Stefan Decker, Markus Löffler, Toralf Kirsten

Drug-Drug Interaction Prediction Based on Knowledge Graph Embeddings and Convolutional-LSTM Network

Published by Md. Rezaul Karim, Michael Cochez, Joao Bosco Jares, Mumtaz Uddin, Oya Beyan, Stefan Decker

Prognostically Relevant Subtypes and Survival Prediction for Breast Cancer Based on Multimodal Genomics Data

Published in IEEE Access by Md. Rezaul Karim, Galih Wicaksono, Ivan G. Costo, Stefan Decker, Oya Beyan

Clinical Decision Support Services to Detect Potential Drug-Drug Interaction using Clinical Quality Language

Published by Binh-Phi Nguyen, Thomas Reese, Stefan Decker, Daniel C. Malone, Richard D. Boyce, Oya Beyan

Distributed Analytics on Sensitive Medical Data: The Personal Health Train

Published in Data Intelligence by Oya Beyan, Ananya Choudry, Johan van Soest, Oliver Kohlbacher, Lukas Zimmermann, Holger Stenzhorn, Md. Rezaul Karim, Michel Dumontier, Stefan Decker, Luiz Olavo Bonino da Silva Santos, Andre Dekker

A Snapshot Neural Ensemble Method for Cancer Type Prediction Based on Copy Number Variations

Published in Neural Computing and Applications by Md. Rezaul Karim, Md Ashiqur Rahman, Joao Bosco Jares, Stefan Decker, Oya Beyan

2018

Smart medical information technology for healthcare (SMITH)

Published by Alfred Winter, Sebastian Stäubert, Danny Ammon, Stephan Aiche, Oya Beyan, Verena Bischoff, Philipp Daumke, Stefan Decker, Gert Funkat, Jan E. Gewehr, Armin de Greiff, Silke Haferkamp, Udo Hahn, Andreas Henkel, Toralf Kirsten, Thomas Klöss, Jörg Lippert, Matthias Löbe, Volker Lowitsch, Oliver Maassen, Jens Maschmann, Sven Meister, Rafael Mikolajczyk, Matthias Nüchter, Mathias W. Pletz, Erhard Rahm, Morris Riedel, Kutaiba Saleh, Andreas Schuppert, Stefan Smers, André Stollenwerk, Stefan Uhlig, Thomas Wendt, Sven Zenker, Wolfgang Fleig, Gernot Marx, André Scherag, Markus Löffler

Mining maximal frequent patterns in transactional databases and dynamic data streams: A spark-based approach

Published by Md. Rezaul Karim, Michael Cochez, Oya Beyan, Chowdhury Farhan Ahmed, Stefan Decker

Schema Extraction for Privacy Preserving Processing of Sensitive Data

Published in Proceedings of the 2nd Workshop on Semantic Web solutions for large-scale biomedical data analytics (SeWeBMeDA) by Lars Gleim, Md. Rezaul Karim, Lukas Zimmermann, Oliver Kohlbacher, Holger Stenzhorn, Stefan Decker, Oya Beyan

Minimum information for dielectric measurements of biological tissues (MINDER): A framework for repeatable and reusable data

Published by Emily Porter, Alessandra La Gioia, Saqib Salahuddin, Stefan Decker, Atif Shahzad, M. Adnan Elahi, Martin O'Halloran, Oya Beyan

A Distributed Analytics Platform to Execute FHIR-based Phenotyping Algorithms

Published by Md. Rezaul Karim, Binh-Phi Nguyen, Lukas Zimmermann, Toralf Kirsten, Matthias Löbe, Frank Meineke, Holger Stenzhorn, Oliver Kohlbacher, Stefan Decker, Oya Beyan

Representing medication guidelines for use in production rule systems in the context of POLYCARE project

Published by Jonas W. Könning, Carlos A. Velasco, Yehya Mohamad, Stefan Decker, Oya Beyan

2017

Towards a FAIR Sharing of Scientific Experiments: Improving Discoverability and Reusability of Dielectric Measurements of Biological Tissues

Published in Proceedings of the 10th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences (SWAT4LS 2017) by Md. Rezaul Karim, Matthias Heinrichs, Lars Gleim, Michael Cochez, Emily Porter, Alessandra La Gioia, Saqib Salahuddin, Martin O'Halloran, Stefan Decker, Oya Beyan

k-RDF-Neighbourhood Anonymity: Combining Structural and Attribute-Based Anonymisation for Linked Data

Published in Workshop on Society, Privacy and the Semantic Web - Policy and Technology (PrivOn 2017) at the International Semantic Web Conference (ISWC) 2017 by Benjamin Heitmann, Felix Hermsen, Stefan Decker

2016

Knowledge representation on the web revisited: the case for prototypes

Published in International Semantic Web Conference (pp. 151-166). Springer International Publishing. by Michael Cochez, Stefan Decker

Knowledge representation on the web revisited: tools for prototype based ontologies.

Published in ArXiv preprint by Michael Cochez, Stefan Decker, Eric Prud'hommeaux

A Framework for Applying Data Integration and Curation Pipelines to Support Integration of Migrants and Refugees in Europe

Published by Oya Beyan, Siegfried Handschuh, Adamantios Koumpis, Garyfallos Fragidis, Stefan Decker

A semantic architecture for preserving and interpreting the information contained in Irish historical vital records

Published by Christophe Debruyne, Oya Beyan, Rebecca Grant, Sandra Collins, Stefan Decker, Natalie Harrower

Towards the use of graph summaries for privacy enhancing release and querying of Linked Data

Published in Workshop on Society, Privacy and the Semantic Web - Policy and Technology (PrivOn 2016) at the International Semantic Web Conference (ISWC) 2016 by Benjamin Heitmann, Felix Hermsen, Stefan Decker

An RDF Based Semantic Approach to Model Temporal Relations in Health Records

Published by Oya Beyan, Stefan Decker

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