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Dr. Oya Deniz Beyan - Publications
2020
Enabling Ad-hoc Reuse of Private Data Repositories through Schema Extraction
Published
in Journal of Biomedical Semantics volume 11, Article number: 6 (2020)
by
Lars Gleim,
Md. Rezaul Karim,
Lukas Zimmermann,
Oliver Kohlbacher,
Holger Stenzhorn,
Stefan Decker,
Oya Beyan
Deep learning-based clustering approaches for bioinformatics
Published
in Briefings in Bioinformatics
by
Md. Rezaul Karim,
Oya Beyan,
Michael Cochez,
Stefan Decker
2019
NFDI4Health: Ein Konzept für eine föderierte Forschungsdateninfrastruktur personenbezogener Gesundheitsdaten.
Published
in Deutsche Gesellschaft für Medizinische Informatik, Biometrie und Epidemiologie. 64. Jahrestagung der Deutschen Gesellschaft für Medizinische Informatik, Biometrie und Epidemiologie e.V. (GMDS)
by
Juliane Fluck,
Iris Pigeot,
Birte Lindstädt,
Thomas Gübitz,
Hajo Zeeb,
Wolfgang Ahrens,
Markus Löffler,
Oana Brosteanu,
Ulrich Lang,
Constanze Curdt,
Sebastian [Claudius] Semler,
Oya Beyan,
Hubertus Neuhausen,
Jens Dierkes,
Ulrich Sax,
Harald Kusch,
Henriette Senst,
Thilo Muth,
Sylvia Thun,
Dietrich Kaiser,
Jochen Dress,
Wolfgang Müller,
Martin Golebiewski
A Snapshot Neural Ensemble Method for Cancer Type Prediction Based on Copy Number Variations
Published
in Neural Computing and Applications
by
Md. Rezaul Karim,
Md Ashiqur Rahman,
Joao Bosco Jares,
Stefan Decker,
Oya Beyan
Distributed Analytics on Sensitive Medical Data: The Personal Health Train
Published
in Data Intelligence
by
Oya Beyan,
Ananya Choudry,
Johan van Soest,
Oliver Kohlbacher,
Lukas Zimmermann,
Holger Stenzhorn,
Md. Rezaul Karim,
Michel Dumontier,
Stefan Decker,
Luiz Olavo Bonino da Silva Santos,
Andre Dekker
Clinical Decision Support Services to Detect Potential Drug-Drug Interaction using Clinical Quality Language
Published
by
Binh-Phi Nguyen,
Thomas Reese,
Stefan Decker,
Daniel C. Malone,
Richard D. Boyce,
Oya Beyan
Helping the consumers and producers of standards, repositories and policies to enable FAIR data
Published
in Data Intelligence
by
Peter McQuilton,
Dominique Batista,
Oya Beyan,
Ramon Granell,
Simon Coles,
Massimiliano Izzo,
Allyson L. Lister,
Robert Pergl,
Philippe Rocca-Serra,
Ben Schaap,
Hugh Shanahan,
Milo Thurston,
Susanna-Assunta Sansone
Prognostically Relevant Subtypes and Survival Prediction for Breast Cancer Based on Multimodal Genomics Data
Published
in IEEE Access
by
Md. Rezaul Karim,
Galih Wicaksono,
Ivan G. Costo,
Stefan Decker,
Oya Beyan
Drug-Drug Interaction Prediction Based on Knowledge Graph Embeddings and Convolutional-LSTM Network
Published
by
Md. Rezaul Karim,
Michael Cochez,
Joao Bosco Jares,
Mumtaz Uddin,
Oya Beyan,
Stefan Decker
Design of Metadata Services for Clinical Data Interoperability in Germany
Published
in Stud Health Technol Inform
by
Matthias Löbe,
Oya Beyan,
Sebastian Stäubert,
Frank Meineke,
Danny Ammon,
Alfred Winter,
Stefan Decker,
Markus Löffler,
Toralf Kirsten
Implementation of Clinical Decision Support Services to Detect Potential Drug-Drug Interaction Using Clinical Quality Language
Published
in Stud Health Technol Inform
by
Binh-Phi Nguyen,
Thomas Reese,
Stefan Decker,
Daniel C. Malone,
Richard D. Boyce,
Oya Beyan
OncoNetExplainer: Explainable Predictions of Cancer Types Based on Gene Expression Data
Published
in 19th IEEE International Conference on Bioinformatics and Bioengineering (IEEE BIBE 2019)
by
Md. Rezaul Karim,
Michael Cochez,
Oya Beyan,
Stefan Decker,
Christoph Lange
Design of the SMITH Metadata Services
Published
by
Matthias Löbe,
Oya Beyan,
Sebastian Stäubert,
Frank Meineke,
Danny Ammon,
Alfred Winter,
Stefan Decker,
Markus Löffler,
Toralf Kirsten
2018
Research Data in the Fraunhofer Digital Project: Creating a FAIR Research Data Infrastructure and Culture
Published
by
Oya Beyan,
Andrea Wuchner,
Dirk Eisengräber-Pabst,
Christoph Quix,
Christian Zaschke,
Oliver Schumacher
A Distributed Analytics Platform to Execute FHIR-based Phenotyping Algorithms
Published
by
Md. Rezaul Karim,
Binh-Phi Nguyen,
Lukas Zimmermann,
Toralf Kirsten,
Matthias Löbe,
Frank Meineke,
Holger Stenzhorn,
Oliver Kohlbacher,
Stefan Decker,
Oya Beyan
Minimum information for dielectric measurements of biological tissues (MINDER): A framework for repeatable and reusable data
Published
by
Emily Porter,
Alessandra La Gioia,
Saqib Salahuddin,
Stefan Decker,
Atif Shahzad,
M. Adnan Elahi,
Martin O'Halloran,
Oya Beyan
Schema Extraction for Privacy Preserving Processing of Sensitive Data
Published
in Proceedings of the 2nd Workshop on Semantic Web solutions for large-scale biomedical data analytics (SeWeBMeDA)
by
Lars Gleim,
Md. Rezaul Karim,
Lukas Zimmermann,
Oliver Kohlbacher,
Holger Stenzhorn,
Stefan Decker,
Oya Beyan
Smart medical information technology for healthcare (SMITH)
Published
by
Alfred Winter,
Sebastian Stäubert,
Danny Ammon,
Stephan Aiche,
Oya Beyan,
Verena Bischoff,
Philipp Daumke,
Stefan Decker,
Gert Funkat,
Jan E. Gewehr,
Armin de Greiff,
Silke Haferkamp,
Udo Hahn,
Andreas Henkel,
Toralf Kirsten,
Thomas Klöss,
Jörg Lippert,
Matthias Löbe,
Volker Lowitsch,
Oliver Maassen,
Jens Maschmann,
Sven Meister,
Rafael Mikolajczyk,
Matthias Nüchter,
Mathias W. Pletz,
Erhard Rahm,
Morris Riedel,
Kutaiba Saleh,
Andreas Schuppert,
Stefan Smers,
André Stollenwerk,
Stefan Uhlig,
Thomas Wendt,
Sven Zenker,
Wolfgang Fleig,
Gernot Marx,
André Scherag,
Markus Löffler
Reproducible Health Data Service Workflows Adoption and Training Guide for Biomedical Service Centers
Published
by
Oya Beyan,
Anthony Juehne,
Kate LeMay,
Ludovica Durst,
Mary Uhlmansiek,
Malcolm Wolski,
Cynthia Hudson Vitale,
Edwin Morley-Fletcher,
Leslie D. McIntosh
2017
Towards a FAIR Sharing of Scientific Experiments: Improving Discoverability and Reusability of Dielectric Measurements of Biological Tissues
Published
in Proceedings of the 10th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences (SWAT4LS 2017)
by
Md. Rezaul Karim,
Matthias Heinrichs,
Lars Gleim,
Michael Cochez,
Emily Porter,
Alessandra La Gioia,
Saqib Salahuddin,
Martin O'Halloran,
Stefan Decker,
Oya Beyan
2016
A semantic architecture for preserving and interpreting the information contained in Irish historical vital records
Published
by
Christophe Debruyne,
Oya Beyan,
Rebecca Grant,
Sandra Collins,
Stefan Decker,
Natalie Harrower
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